PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011071636.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family TCP
Protein Properties Length: 349aa    MW: 36676.8 Da    PI: 9.902
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011071636.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP72.61.2e-22731713089
             TCP  30 arfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg................................... 88 
                     + +F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s +                                   
  XP_011071636.1  73 RSVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNMSLRSSGSSMSLPsqlrstffspnytvpqrrgifpgiglspetssttl 167
                     78***************************************999766666777665555566666777777778787777777776543333333 PP

             TCP  89 ...k 89 
                        +
  XP_011071636.1 168 lnfQ 171
                     3331 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS513699.78272105IPR017887Transcription factor TCP subgroup
PfamPF036343.5E-2573216IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MIISTTTAAA PTSLSNYSRR KMTNPPAAPA SLPSPPPQPS HHQTLAPPLV RVPQLLPRVS  60
PSPPQNPPRS RRRSVFQLTR ELGHKSDGET IEWLLQQAEP AVIAATGTGT IPANFTSLNM  120
SLRSSGSSMS LPSQLRSTFF SPNYTVPQRR GIFPGIGLSP ETSSTTLLNF QAPNLNHSLM  180
QTKQEMRENS LDLTETTAED GLGRKRRAPD ELQQAAEHHQ IGSYLLQSST GAMPASHASI  240
PANFWMVGSS NNNQIQGTDP IWTFPSVNNT AAALYRAGMS SGLHFMNLPT SVTLLPGGSS  300
GGGGGGNGSG EGQWGMLAGL NPHRDGGAGG GGSESQASRS HGGGDDTTS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071636.10.0PREDICTED: transcription factor TCP14
SwissprotQ93Z006e-40TCP14_ARATH; Transcription factor TCP14
TrEMBLM1D6K81e-103M1D6K8_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000831481e-103(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28822351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47620.19e-35TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14